Citation: WAN A-Jun, WANG Kun, ZHANG Hong-Cai, LI Hui-Li, WANG De-Nong. Modern Carbohydrate Microarray Bio-chip Technologies[J]. Chinese Journal of Analytical Chemistry, ;2012, 40(11): 1780-1788. doi: 10.3724/SP.J.1096.2012.20448 shu

Modern Carbohydrate Microarray Bio-chip Technologies

WAN A-Jun ^1,, ,
WANG Kun ² ,
ZHANG Hong-Cai ^1,2 ,
LI Hui-Li ³ ,
WANG De-Nong ^4,,

1.
¹ School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai 200240, China;

Corresponding author: WAN A-Jun, WANG De-Nong,
Received Date: 27 April 2012
Available Online: 16 June 2012
Fund Project: 本文系中国国家自然科学基金项目(No. 51173104) (No. 51173104)上海纳米专项(No. 11nm0503500) (No. 11nm0503500)美国NIH基金项目(No. CA128416)资助 (No. CA128416)

Carbohydrate microarray (glyco-chip), is one of modern biotechnologies for monitoring the molecular interactions between carbohydrate ligands and other biomacromolecules. It is characterized by micro-scale, quickness, high sensitivity and high-throughput and is widely applicable in many fields. Its promising R & D areas include, but are not limited to, biology, basic medical research, clinical diagnostics, drug development and bio-material & reagent industry. This article intends to summarize methods that are currently used for the construction of glyco-chips, such as immobilization of either chemically modified or non-modified carbohydrates and procedures of self-assembly for production of three-dimensional glyco-chips. Current challenges and future trends in the R & D of glyco-chips are also discussed.
- Microarray,
- Bio-chips,
- Carbohydrate microarray,
- Self-assembly,
- Review
1. [1]
  1 Shin I, Park S, Lee M R. Chem-Eur J., 2005, 11(10): 2894-2901
2. [2]
  2 Godula K, Bertozzi C R. J. Am. Chem. Soc., 2010, 132(29): 9963-9965
3. [3]
  3 Liu Y. Biochem. Soc. T, 2010, 38: 1361-1367
4. [4]
  4 Galan M C, Corfield A P. Biochem. Soc. T., 2010, 38: 1368-1373
5. [5]
  5 Huang C H, Chen Y Y, Wang C X, Zhu W, Ma H W, Jin G. Thin. Solid. Films., 2011, 519(9): 2763-2277
6. [6]
  6 Tokunaga Y, Iwamoto T, Nakashima S, Shoji E, Nakata R. Tetrahedron. Lett., 2011, 52(2): 240-243
7. [7]
  7 Kiessling L L,Cairo C W. Nat. Biotechnol., 2002, 20(3): 234-235
8. [8]
  8 Liu Y,Palma A S, Feizi T. Biol. Chem., 2009, 390(7): 647-656
9. [9]
  9 Wang D N. Proteomics, 2003, 3(11): 2167-2175
10. [10]
  10 Seeberger P H, Werz D B. Nature, 2007, 446(7139): 1046-1051
11. [11]
  11 Horlacher T, Oberli M A, Werz D B, Krock L, Bufali S, Mishra R, Sobek J, Simons K, Hirashima M, Niki T, Seeberger P H. Chembiochem., 2010, 11(11): 1563-1573
12. [12]
  12 Stevens J, Blixt O, Paulson J C, Wilson I A. Nat. Rev. Microbiol., 2006, 4 (11): 1857-1864
13. [13]
  13 Smith A E, Helenius A. Science, 2004, 304 (5668): 1237-1242
14. [14]
  14 Fuster M M, Esko, J D. Nat. Rev. Cancer,2005, 5 (7): 1526-1542
15. [15]
  15 Park S, Pai J, Han E H, Jun C H,Shin I. Bioconjugate. Chem., 2010, 21(7): 1246-1253
16. [16]
  16 Szunerits S, Niedziolka-Jonsson J, Boukherroub R, Woisel P, Baumann J S, Siriwardena A. Anal. Chem., 2010, 82(19): 8203-8210
17. [17]
  17 Chang C F, Pan J F, Lin C N, Wu I L, Wong C H, Lin C H. Glycobiology, 2011, 21(7): 895-902
18. [18]
  18 Hoffmann-Roder A, Schoenhentz J, Wagner S, Schmitt E. Chem. Commun., 2011, 47(1): 382-384
19. [19]
  19 Hsiao H Y, Chen M L, Wu H T, Huang L D, Chien W T, Yu C C, Jan F D. Sahabuddin S, Chang T C, Lin C C. Chem. Commun., 2011, 47(4): 1187-1189
20. [20]
  20 Lee M R, Park S,Shin I. Methods. Mol. Biol., 2012, 808,103-1116
21. [21]
  21 Oyelaran O, Gildersleeve J C. Curr. Opin. Chem. Biol., 2009, 13 (4): 406-1413
22. [22]
  22 Tantakitti F, Burk-Rafel J, Cheng F, Egnatchik R, Owen T, Hoffman M, Weiss D N, Ratner D M. Langmuir, 2012, 28 (17): 6950-6959
23. [23]
  23 Wang D N, Liu S Y, Trummer B J, Deng C, Wang A L. Nat. Biotechnol., 2002, 20(3): 275-281
24. [24]
  24 Deng L Q, Norberg O, Uppalapati S, Yan M D, Ramstrom O. Org Biomol. Chem., 2011, 9(9): 3188-3198
25. [25]
  25 Tamborrini M, Liu X Y, Mugasa J P, Kwon Y U, Kamena F, Seeberger P H, Pluschke G. Bioorgan. Med. Chem., 2010, 18(11): 3747-3752
26. [26]
  26 Seo J H, Kim C S, Hwang B H, Cha H J. Nanotechnol., 2010, 21(21): 215101
27. [27]
  27 Dyukova V I, Shilova N V, Galanina O E, Rubina A Y, Bovin N V. Bba-Gen. Subjects., 2006,1760(4): 603-609
28. [28]
  28 Feizi T. Int. Exp. Pathol., 2004, 85(4): A51-A52
29. [29]
  29 Feizi T. Febs. J, 2006, 273: 27
30. [30]
  30 Feizi T, Chai W G. Nat. Rev. Mol. Cell. Bio., 2004, 5(7): 582-588
31. [31]
  31 Feizi T, Fazio F, Chai W C, Wong C H. Curr. Opin. Struc. Biol., 2003, 13(5): 637-645
32. [32]
  32 Wang C C, Huang Y L, Ren C T, Lin C W, Hung J T, Yu J C, Yu A L, Wu C Y, Wong C H. Proc. Natl. Acad. Sci. USA., 2008, 105(33): 11661-11666
33. [33]
  33 Wang D N, Carroll G T, Turro N J, Koberstein J T, Kovac P, Saksena R, Adamo R, Herzenberg L A, Steinman L. Proteomics, 2007,7(2): 180-184
34. [34]
  34 Wang D. Methods. Mol. Biol., 2012, 808: 241-249
35. [35]
  35 Willats W G T, Rasmussen S E, Kristensen T, Mikkelsen J D, Knox J P. Proteomics, 2002, 2(12): 1666-1671
36. [36]
  36 Zou L, Pang H L, Chan P H, Huang Z S, Gu L Q, Wong K Y. Analyst, 2008, 133(9): 1195-1200
37. [37]
  37 Park S, Lee M R, Shin I. Bioconjugate. Chem., 2009, 20(1): 155-162
38. [38]
  38 Ebran J P, Dendane N, Melnyk O. Methods. Mol. Biol., 2012, 808: 377-391
39. [39]
  39 Sharma P, Basir S F, Nahar P. J. Colloid. Interf. Sci., 2010, 342(1): 202-204
40. [40]
  40 Mamidyala S K, Ko K S, Jaipuri F A, Park G, Pohl N L. J. Fluorine. Chem., 2006, 127(4-5): 571-579
41. [41]
  41 Norberg O, Deng L Q, Aastrup T, Yan M D, Ramstrom O. Anal. Chem., 2011, 83(3): 1000-1007
42. [42]
  42 Ratner D M, Seeberger P H. Curr. Pharm. Design., 2007, 13(2): 173-183
43. [43]
  43 Tong Q, Wang X, Wang H, Kubo T, Yan M. Anal. Chem., 2012, 84 (7): 3049-3052
44. [44]
  44 Patwa T, Li C, Simeone D M, Lubman D M. Mass. Spectrom. Rev., 2010, 29(5): 830-844
45. [45]
  45 Kosik O, Auburn R P, Russell S, Stratilova E, Garajova S, Hrmova M, Farkas V. Glycoconjugate. J., 2010, 27(1): 79-87
46. [46]
  46 Park S, Lee M R, Shin I. Chem. Commun., 2008, (37): 4389-4399
47. [47]
  47 Park S, Lee M R, Pyo S J, Shin I. J. Am. Chem. Soc., 2004, 126(15): 4812-4819
48. [48]
  48 Park S, Lee M R, Shin I. Nat. Protoc., 2007, 2(11): 2747-2758
49. [49]
  49 GuptaG, Surolia A, Sampathkumar S G. Omics, 2010, 14(4): 419-436
50. [50]
  50 Pond M A, Zangmeister R A. Talanta, 2012, 91(15): 134-139
51. [51]
  51 Lucas J M. Allergol. Immunopath, 2010, 38(3): 153-161
52. [52]
  52 Zhang Y L, Campbell C, Li Q A, Gildersleeve J C. Mol. Biosyst., 2010, 6(9): 1583-1591
53. [53]
  53 Han E, Ding L, Jin S, Ju H X. Biosens. Bioelectron., 2011, 26(5): 2500-2505
54. [54]
  54 Zhang J, Pourceau G, Meyer A, Vidal S, Praly J P, Souteyrand E, Vasseur J J, Morvan F, Chevolot Y. Chem. Commun, 2009, (44): 6795-6797
55. [55]
  55 Suvorov A, Takser L. Environ. Health. Persp., 2010, 118(1): 97-102
56. [56]
  56 LiB Z, Cheng J S, Qiao B, Yuan Y J. J. Ind. Microbiol. Biot., 2010, 37(1): 43-55
57. [57]
  57 Ratner D M, Seeberger P H. Curr. Pharm. Design., 2007, 13(2): 173-183
58. [58]
  58 Tetala K K R, Heikema A P, Pukin A V, Weijers C A G M, Tio-Gillen A P, Gilbert M, Endtz H P, van Belkum A, Zuilhof H,Visser G M, Jacobs B C, van Beek T A. J. Med. Chem., 2011, 54(10): 3500-3505
59. [59]
  59 Pieters R J. Adv. Exp. Med. Biol., 2011, 715: 227-240
60. [60]
  60 Wang X, Ramstrom O, Yan M D. Chem. Commun, 2011, 47(14): 4261-4263
61. [61]
  61 Berger R, Delamarche E, Lang H P, Gerber C, Gimzewski J K, Meyer E, Guntherodt H J. Science, 1997, 276(5321): 2021-2024
62. [62]
  62 Nelson J.Science, 2001, 293(5532): 1059-1060
63. [63]
  63 Yan D Y, Zhou Y F, Hou J. Science, 2004, 303(5654): 65-67
64. [64]
  64 Wiesner U, Arora H, Du P, Tan K W, Hyun J K, Grazul J, Xin H L, Muller D A, Thompson M O. Science, 2010, 330(6001): 214-219
65. [65]
  65 EstevezJ M, Velasquez S M, Ricardi M M, Dorosz J G, Fernandez P V, Nadra A D, Pol-Fachin L, Egelund J, Gille S, Harholt J, Ciancia M, Verli H, Pauly M, Bacic A, Olsen C E, Ulvskov P, Petersen B L, Somerville C, Iusem N D. Science, 2011, 332(6036): 1401-1403
66. [66]
  66 Zhang X J, Yadavalli V K. Anal. Chim. Acta, 2009, 649(1): 1-7
67. [67]
  67 PeraN P, Branderhorst H M, Kooij R, Maierhofer C, van der Kaaden M, Liskamp R M J, Wittmann V, Ruijtenbeek R, Pieters R J. Chembiochem., 2010,11(13): 1896-1904
68. [68]
  68 Huang K T, Gorska K, Alvarez S, Barluenga S, Winssinger N. Chembiochem,. 2011, 12(1): 56-60
69. [69]
  69 Dhayal M, Ratner D A. Langmuir, 2009, 25(4): 2181-2187
70. [70]
  70 Dyukova V I, Dementieva E I, Zubtsov D A, Galanina O E, Bovin N V. Anal. Biochem., 2005, 347 (1): 94-105
71. [71]
  71 Ke B B, Wan L S, Xu Z K. Langmuir, 2010, 26(11): 8946-8952
72. [72]
  72 Pulsipher A, Yousaf M N. Chem. Commun, 2011, 47(1): 523-525
73. [73]
  73 Zhou X C, Turchi C, Wang D N. J. Proteome. Res., 2009, 8(11): 5031-5040
74. [74]
  74 Tyagi A, Wang X, Deng L Q, Ramstrom O, Yan M D. Biosens. Bioelectron., 2010, 26(2): 344-350
75. [75]
  75 Tantakitti F, Burk-Rafel J, Cheng F, Egnatchik R, Owen T, Hoffman M, Weiss D N, Ratner D M. Langmuir, 2012, 28 (17): 6950-6959
76. [76]
  76 Lonardi E, Balog C I A, Deelder A M, Wuhrer M. Expert. Rev. Proteomic, 2010, 7(5): 761-774
77. [77]
  77 Gregory T C, Wang D, Nicholas J T, Jeffrey T K. Langmuir, 2006, 22(6): 2899-2905
78. [78]
  78 Wang D N, Carroll G T, Turbo N J, Kobestein J T, Kovac P, Saksena R, Adamo R, Herzenberg L A, Steinman L. Proteomics, 2007, 7(2): 180-118
79. [79]
  79 Scurr D J, Horlacher T, Oberli M A, Werz D B, Kroeck L, Bufali S, Seeberger P H, Shard A G, Alexander M R. Langmuir, 2010, 26(22): 17143-17155
80. [80]
  80 Li Y S, Arigi E, Eichert H, Levery S B. J. Mass. Spectrom., 2010, 45(5): 504-519
81. [81]
  81 Gao J Q, Liu C, Liu D J, Wang Z X, Dong S J. Talanta, 2010, 81(4-5): 1816-1820
82. [82]
  82 Zeng Z, Hincapie M, Haab B B, Hanash S, Pitteri S J, Kluck S, Hogan J M, Kennedy J, Hancock W S. J. Chromatogr. A, 2010, 1217(19): 3307-3315
83. [83]
  83 Zhu X Y, Holtz B, Wang Y N, Wang L X, Orndorff P E, Guo A. J. Am. Chem. Soc., 2009, 131(38): 13646-13650
84. [84]
  84 Katrlik J, Svitel J, Gemeiner P, Kozar T, Tkac J. Med. Res. Rev., 2010, 30(2): 394-418
85. [85]
  85 Szczepanek J, Styczynski J, Haus O, Tretyn A, Wysocki M. Arch. Immunol. Ther. Ex., 2011, 59(1): 61-68
86. [86]
  86 Wendeln C, Ravoo B J. Langmuir, 2012, 28 (13): 15527-15538
1. [1]
  Jin Tong , Shuyan Yu . Crystal Engineering for Supramolecular Chirality. University Chemistry, 2024, 39(3): 86-93. doi: 10.3866/PKU.DXHX202308113
2. [2]
  Ruoxi Sun , Yiqian Xu , Shaoru Rong , Chunmiao Han , Hui Xu . The Enchanting Collision of Light and Time Magic: Exploring the Footprints of Long Afterglow Lifetime. University Chemistry, 2024, 39(5): 90-97. doi: 10.3866/PKU.DXHX202310001
3. [3]
  Zhibei Qu , Changxin Wang , Lei Li , Jiaze Li , Jun Zhang . Organoid-on-a-Chip for Drug Screening and the Inherent Biochemistry Principles. University Chemistry, 2024, 39(7): 278-286. doi: 10.3866/PKU.DXHX202311039
4. [4]
  Shihui Shi , Haoyu Li , Shaojie Han , Yifan Yao , Siqi Liu . Regioselectively Synthesis of Halogenated Arenes via Self-Assembly and Synergistic Catalysis Strategy. University Chemistry, 2024, 39(5): 336-344. doi: 10.3866/PKU.DXHX202312002
5. [5]
  Wenjian Zhang , Mengxin Fan , Wenwen Fei , Wei Bai . Cultivation of Critical Thinking Ability: Based on RAFT Polymerization-Induced Self-Assembly. University Chemistry, 2025, 40(4): 108-112. doi: 10.12461/PKU.DXHX202406099
6. [6]
  Xiaofei NIU , Ke WANG , Fengyan SONG , Shuyan YU . Self-assembly of [Pd₆(L)₄]⁸⁺-type macrocyclic complexes for fluorescent sensing of HSO₃^-. Chinese Journal of Inorganic Chemistry, 2024, 40(7): 1233-1242. doi: 10.11862/CJIC.20240057
7. [7]
  Min Gu , Huiwen Xiong , Liling Liu , Jilie Kong , Xueen Fang . Rapid Quantitative Detection of Procalcitonin by Microfluidics: An Instrumental Analytical Chemistry Experiment. University Chemistry, 2024, 39(4): 87-93. doi: 10.3866/PKU.DXHX202310120
8. [8]
  Qin Tu , Anju Tao , Tongtong Ma , Jinyi Wang . Innovative Experimental Teaching of Escherichia coli Detection Based on Paper Chip. University Chemistry, 2024, 39(6): 271-277. doi: 10.3866/PKU.DXHX202309062
9. [9]
  .
  CCS Chemistry 综述推荐│绿色氧化新思路：光/电催化助力有机物高效升级
  . CCS Chemistry, 2025, 7(10.31635/ccschem.024.202405369): -.
10. [10]
  Yiling Wu , Peiyao Jin , Shenyue Tian , Ji Zhang . The Star of Sugar Substitutes: An Interview of Erythritol. University Chemistry, 2024, 39(9): 22-27. doi: 10.12461/PKU.DXHX202404034
11. [11]
  Yuhang Jiang , Weijie Liu , Jiaqi Cai , Jiayue Chen , Yanping Ren , Pingping Wu , Liulin Yang . A Journey into the Science and Art of Sugar: “Dispersion of Light and Optical Rotation of Matter” Science Popularization Experiment. University Chemistry, 2024, 39(9): 288-294. doi: 10.12461/PKU.DXHX202401054
12. [12]
  Endong YANG , Haoze TIAN , Ke ZHANG , Yongbing LOU . Efficient oxygen evolution reaction of CuCo₂O₄/NiFe-layered bimetallic hydroxide core-shell nanoflower sphere arrays. Chinese Journal of Inorganic Chemistry, 2024, 40(5): 930-940. doi: 10.11862/CJIC.20230369
13. [13]
  Liang MA , Honghua ZHANG , Weilu ZHENG , Aoqi YOU , Zhiyong OUYANG , Junjiang CAO . Construction of highly ordered ZIF-8/Au nanocomposite structure arrays and application of surface-enhanced Raman spectroscopy. Chinese Journal of Inorganic Chemistry, 2024, 40(9): 1743-1754. doi: 10.11862/CJIC.20240075
14. [14]
  Fengqiao Bi , Jun Wang , Dongmei Yang . Specialized Experimental Design for Chemistry Majors in the Context of “Dual Carbon”: Taking the Assembly and Performance Evaluation of Zinc-Air Fuel Batteries as an Example. University Chemistry, 2024, 39(4): 198-205. doi: 10.3866/PKU.DXHX202311069
15. [15]
  . . Chinese Journal of Inorganic Chemistry, 2024, 40(12): 0-0.
16. [16]
  Haitang WANG , Yanni LING , Xiaqing MA , Yuxin CHEN , Rui ZHANG , Keyi WANG , Ying ZHANG , Wenmin WANG . Construction, crystal structures, and biological activities of two Ln^Ⅲ₃ complexes. Chinese Journal of Inorganic Chemistry, 2024, 40(8): 1474-1482. doi: 10.11862/CJIC.20240188
17. [17]
  Xiaowei TANG , Shiquan XIAO , Jingwen SUN , Yu ZHU , Xiaoting CHEN , Haiyan ZHANG . A zinc complex for the detection of anthrax biomarker. Chinese Journal of Inorganic Chemistry, 2024, 40(10): 1850-1860. doi: 10.11862/CJIC.20240173
18. [18]
  Jianfeng Yan , Yating Xiao , Xin Zuo , Caixia Lin , Yaofeng Yuan . Comprehensive Chemistry Experimental Design of Ferrocenylphenyl Derivatives. University Chemistry, 2024, 39(4): 329-337. doi: 10.3866/PKU.DXHX202310005
19. [19]
  Dan Li , Hui Xin , Xiaofeng Yi . Comprehensive Experimental Design on Ni-based Catalyst for Biofuel Production. University Chemistry, 2024, 39(8): 204-211. doi: 10.3866/PKU.DXHX202312046
20. [20]
  Yang Liu , Peng Chen , Lei Liu . Chemistry “101 Plan”: Design and Construction of Chemical Biology Textbook. University Chemistry, 2024, 39(10): 45-51. doi: 10.12461/PKU.DXHX202407085

Get Citation

PDF

XML

Metrics

PDF Downloads(0)
Abstract views(570)
HTML views(153)

通讯作者: 陈斌, bchen63@163.com

1.
沈阳化工大学材料科学与工程学院沈阳 110142