Citation: LIN Ke-Jiang, ZHU Dong-Ji, LENG Yong-Gan, YOU Qi-Dong. Structural Characterization of Human Parathyroid Hormone 1 Receptor[J]. Acta Physico-Chimica Sinica, 2012, 28(07): 1783-1789. doi: 10.3866/PKU.WHXB201204192
人甲状腺旁素1型受体的结构特征
English
Structural Characterization of Human Parathyroid Hormone 1 Receptor
Parathyroid hormone 1 receptor (PTH1R) is a member of the class B G-protein coupled receptor (B-GPCR) family and is involved in bone formation. Its substrate parathyroid hormone (PTH) and its analogues are being developed as anti-osteoporosis therapeutics. The structure-based rational drug design of PTH1R substrates has been hampered by the lack of experimentally determined three-dimensional (3D) structures from techniques such as nuclear magnetic resonance (NMR) and X-ray crystallography. Here, we have constructed a 3D model of PTH1R including its extracellular domain (ECD), transmembrane domain (TM) and other domains using a homology modeling approach. In addition, to capture the ligand-receptor interactions, we have manually docked human parathyroid hormone (1-34) into the top scoring receptor model, and subjected the PTH-PTH1R complex to an unconstrained energy minimization. The integral 3D receptor model provides an easier way to understand the interactions involved at the TM, ECD, and other domains. Furthermore, the parameters of hydrogen bonding, hydrophobic, and other interactions from the ligand-receptor model, enabled us to elucidate the important interactions between PTH (1-34) and PTH1R. This ligand-receptor model could potentially serve as a tool for structure-based virtual screening in the development of non-peptide based anti-osteoporosis drugs.
-
-
[1]
(1) Potts, J. T.; Gardella, T. J. Annals of the New York Academy of Sciences 2007, 1117, 196. doi: 10.1196/annals.1402.088
(1) Potts, J. T.; Gardella, T. J. Annals of the New York Academy of Sciences 2007, 1117, 196. doi: 10.1196/annals.1402.088
-
[2]
(2) Potts, J. T. J. Endocrinol. 2005, 187, 311. doi: 10.1677/joe.1.06057(2) Potts, J. T. J. Endocrinol. 2005, 187, 311. doi: 10.1677/joe.1.06057
-
[3]
(3) Murray, T. M.; Rao, L. G.; Divieti, P.; Bringhurst, F. R. Endocr. Rev. 2005, 26, 78. doi: 10.1210/er.2003-0024(3) Murray, T. M.; Rao, L. G.; Divieti, P.; Bringhurst, F. R. Endocr. Rev. 2005, 26, 78. doi: 10.1210/er.2003-0024
-
[4]
(4) Gardella, T. J.; Juppner, H. Trends Endocrinol. Metab. 2001, 12,210. doi: 10.1016/S1043-2760(01)00409-X(4) Gardella, T. J.; Juppner, H. Trends Endocrinol. Metab. 2001, 12,210. doi: 10.1016/S1043-2760(01)00409-X
-
[5]
(5) Juppner, H.; Abou-Samra, A. B.; Freeman, M.; Kong, X. F.;Schipani, E.; Richards, J.; Kolakowski, L. F., Jr.; Hock, J.; Potts,J. T., Jr.; Kronenberg, H. M. Science 1991, 254, 1024. doi: 10.1126/science.1658941(5) Juppner, H.; Abou-Samra, A. B.; Freeman, M.; Kong, X. F.;Schipani, E.; Richards, J.; Kolakowski, L. F., Jr.; Hock, J.; Potts,J. T., Jr.; Kronenberg, H. M. Science 1991, 254, 1024. doi: 10.1126/science.1658941
-
[6]
(6) Pioszak, A. A.; Harikumar, K. G.; Parker, N. R.; Miller, L. J.;Xu, H. E. J. Biol. Chem. 2010, 285, 12435. doi: 10.1074/jbc.M109.093138(6) Pioszak, A. A.; Harikumar, K. G.; Parker, N. R.; Miller, L. J.;Xu, H. E. J. Biol. Chem. 2010, 285, 12435. doi: 10.1074/jbc.M109.093138
-
[7]
(7) Pioszak, A. A.; Xu, H. E. Proc. Natl. Acad. Sci. U. S. A. 2008,105, 5034. doi: 10.1073/pnas.0801027105(7) Pioszak, A. A.; Xu, H. E. Proc. Natl. Acad. Sci. U. S. A. 2008,105, 5034. doi: 10.1073/pnas.0801027105
-
[8]
(8) Jin, L.; Briggs, S. L.; Chandrasekhar, S.; Chirgadze, N. Y.;Clawson, D. K.; Schevitz, R.W.; Smiley, D. L.; Tashjian, A. H.;Zhang, F. J. Biol. Chem. 2000, 275, 27238.(8) Jin, L.; Briggs, S. L.; Chandrasekhar, S.; Chirgadze, N. Y.;Clawson, D. K.; Schevitz, R.W.; Smiley, D. L.; Tashjian, A. H.;Zhang, F. J. Biol. Chem. 2000, 275, 27238.
-
[9]
(9) Rolz, C.; Pellegrini, M.; Mierke, D. F. Biochemistry 1999, 38,6397. doi: 10.1021/bi9829276(9) Rolz, C.; Pellegrini, M.; Mierke, D. F. Biochemistry 1999, 38,6397. doi: 10.1021/bi9829276
-
[10]
(10) Discovery Studio, 2.5; Accelrys Software Inc.: San Die , US,2010.(10) Discovery Studio, 2.5; Accelrys Software Inc.: San Die , US,2010.
-
[11]
(11) Pellegrini, M.; Bisello, A.; Rosenblatt, M.; Chorev, M.; Mierke,D. F. Biochemistry 1998, 37, 12737. doi: 10.1021/bi981265h(11) Pellegrini, M.; Bisello, A.; Rosenblatt, M.; Chorev, M.; Mierke,D. F. Biochemistry 1998, 37, 12737. doi: 10.1021/bi981265h
-
[12]
(12) Cherezov, V.; Rosenbaum, D. M.; Hanson, M. A.; Rasmussen,S. G.; Thian, F. S.; Kobilka, T. S.; Choi, H. J.; Kuhn, P.;Weis,W. I.; Kobilka, B. K.; Stevens, R. C. Science 2007, 318, 1258.doi: 10.1126/science.1150577(12) Cherezov, V.; Rosenbaum, D. M.; Hanson, M. A.; Rasmussen,S. G.; Thian, F. S.; Kobilka, T. S.; Choi, H. J.; Kuhn, P.;Weis,W. I.; Kobilka, B. K.; Stevens, R. C. Science 2007, 318, 1258.doi: 10.1126/science.1150577
-
[13]
(13) Kerfeld, C. A.; Anwar, H. P.; Interrante, R.; Merchant, S.;Yeates, T. O. J. Mol. Biol. 1995, 250, 627. doi: 10.1006/jmbi.1995.0404(13) Kerfeld, C. A.; Anwar, H. P.; Interrante, R.; Merchant, S.;Yeates, T. O. J. Mol. Biol. 1995, 250, 627. doi: 10.1006/jmbi.1995.0404
-
[14]
(14) Thompson, J. D.; Higgins, D. G.; Gibson, T. J. Nucleic Acids Res. 1994, 22, 4673. doi: 10.1093/nar/22.22.4673(14) Thompson, J. D.; Higgins, D. G.; Gibson, T. J. Nucleic Acids Res. 1994, 22, 4673. doi: 10.1093/nar/22.22.4673
-
[15]
(15) Spassov, V.; Yan, L.; Szalma, S. J. Phys. Chem. B 2002, 106,8726. doi: 10.1021/jp020674r(15) Spassov, V.; Yan, L.; Szalma, S. J. Phys. Chem. B 2002, 106,8726. doi: 10.1021/jp020674r
-
[16]
(16) Im,W.; Lee, M. S.; Brooks, C. L. J. Comput. Chem. 2003, 24,1691. doi: 10.1002/jcc.10321(16) Im,W.; Lee, M. S.; Brooks, C. L. J. Comput. Chem. 2003, 24,1691. doi: 10.1002/jcc.10321
-
[17]
(17) Luthy, R.; Bowie, J. U.; Eisenberg, D. Nature 1992, 356, 83.doi: 10.1038/356083a0(17) Luthy, R.; Bowie, J. U.; Eisenberg, D. Nature 1992, 356, 83.doi: 10.1038/356083a0
-
[18]
(18) Lovell, S. C.; Davis, I.W.; Arendall,W. B., III; de Bakker, P. I.;Word, J. M.; Prisant, M. G.; Richardson, J. S.; Richardson, D.C. Proteins 2003, 50, 437. doi: 10.1002/prot.10286(18) Lovell, S. C.; Davis, I.W.; Arendall,W. B., III; de Bakker, P. I.;Word, J. M.; Prisant, M. G.; Richardson, J. S.; Richardson, D.C. Proteins 2003, 50, 437. doi: 10.1002/prot.10286
-
[19]
(19) Adams, A. E.; Bisello, A.; Chorev, M.; Rosenblatt, M.; Suva, L.J. Mol. Endocrinol. 1998, 12, 1673. doi: 10.1210/me.12.11.1673(19) Adams, A. E.; Bisello, A.; Chorev, M.; Rosenblatt, M.; Suva, L.J. Mol. Endocrinol. 1998, 12, 1673. doi: 10.1210/me.12.11.1673
-
[20]
(20) Fletcher, R.; Powell, M. J. D. The Computer Journal 1963, 6,163.(20) Fletcher, R.; Powell, M. J. D. The Computer Journal 1963, 6,163.
-
[21]
(21) Grippo, L.; Lucidi, S. Mathematical Programming 1997, 78,375.(21) Grippo, L.; Lucidi, S. Mathematical Programming 1997, 78,375.
-
[22]
(22) MOE, 2009; Chemical Computing Group: Montreal, Canada,2009.(22) MOE, 2009; Chemical Computing Group: Montreal, Canada,2009.
-
[23]
(23) Clark, A. M.; Labute, P. J. Chem. Inf. Model. 2007, 47, 1933.doi: 10.1021/ci7001473(23) Clark, A. M.; Labute, P. J. Chem. Inf. Model. 2007, 47, 1933.doi: 10.1021/ci7001473
-
[24]
(24) Greenberg, Z.; Bisello, A.; Mierke, D. F.; Rosenblatt, M.;Chorev, M. Biochemistry 2000, 39, 8142. doi: 10.1021/bi000195n(24) Greenberg, Z.; Bisello, A.; Mierke, D. F.; Rosenblatt, M.;Chorev, M. Biochemistry 2000, 39, 8142. doi: 10.1021/bi000195n
-
[25]
(25) Sali, A. Mol. Med. Today 1995, 1, 270. doi: 10.1016/S1357-4310(95)91170-7(25) Sali, A. Mol. Med. Today 1995, 1, 270. doi: 10.1016/S1357-4310(95)91170-7
-
[26]
(26) Dean, T.; Khatri, A.; Potetinova, Z.;Willick, G. E.; Gardella, T.J. J. Biol. Chem. 2006, 281, 32485. doi: 10.1074/jbc.M606179200(26) Dean, T.; Khatri, A.; Potetinova, Z.;Willick, G. E.; Gardella, T.J. J. Biol. Chem. 2006, 281, 32485. doi: 10.1074/jbc.M606179200
-
[27]
(27) Barbier, J. R.; Gardella, T. J.; Dean, T.; MacLean, S.;Potetinova, Z.; Whitfield, J. F.;Willick, G. E. J. Biol. Chem.2005, 280, 23771. doi: 10.1074/jbc.M500817200(27) Barbier, J. R.; Gardella, T. J.; Dean, T.; MacLean, S.;Potetinova, Z.; Whitfield, J. F.;Willick, G. E. J. Biol. Chem.2005, 280, 23771. doi: 10.1074/jbc.M500817200
-
[28]
(28) Mierke, D. F.; Maretto, S.; Schievano, E.; DeLuca, D.; Bisello,A.; Mammi, S.; Rosenblatt, M.; Peggion, E.; Chorev, M.Biochemistry 1997, 36, 10372. doi: 10.1021/bi970771o(28) Mierke, D. F.; Maretto, S.; Schievano, E.; DeLuca, D.; Bisello,A.; Mammi, S.; Rosenblatt, M.; Peggion, E.; Chorev, M.Biochemistry 1997, 36, 10372. doi: 10.1021/bi970771o
-
[29]
(29) Caporale, A.; Biondi, B.; Schievano, E.;Wittelsberger, A.;Mammi, S.; Peggion, E. Eur. J. Pharmacol. 2009, 611, 1. doi: 10.1016/j.ejphar.2009.03.040(29) Caporale, A.; Biondi, B.; Schievano, E.;Wittelsberger, A.;Mammi, S.; Peggion, E. Eur. J. Pharmacol. 2009, 611, 1. doi: 10.1016/j.ejphar.2009.03.040
-
[30]
(30) Pioszak, A. A.; Parker, N. R.; Gardella, T. J.; Xu, H. E. J. Biol. Chem. 2009, 284, 28382. doi: 10.1074/jbc.M109.022905(30) Pioszak, A. A.; Parker, N. R.; Gardella, T. J.; Xu, H. E. J. Biol. Chem. 2009, 284, 28382. doi: 10.1074/jbc.M109.022905
-
[31]
(31) Piserchio, A.; Bisello, A.; Rosenblatt, M.; Chorev, M.; Mierke,D. F. Biochemistry 2000, 39, 8153. doi: 10.1021/bi000196f(31) Piserchio, A.; Bisello, A.; Rosenblatt, M.; Chorev, M.; Mierke,D. F. Biochemistry 2000, 39, 8153. doi: 10.1021/bi000196f
-
[32]
(32) Hoare, S. R. Drug Discov. Today 2005, 10, 417. doi: 10.1016/S1359-6446(05)03370-2(32) Hoare, S. R. Drug Discov. Today 2005, 10, 417. doi: 10.1016/S1359-6446(05)03370-2
-
[33]
(33) Mierke, D. F.; Mao, L.; Pellegrini, M.; Piserchio, A.; Plati, J.;Tsomaia, N. Biochem. Soc. Trans. 2007, 35, 721. doi: 10.1042/BST0350721(33) Mierke, D. F.; Mao, L.; Pellegrini, M.; Piserchio, A.; Plati, J.;Tsomaia, N. Biochem. Soc. Trans. 2007, 35, 721. doi: 10.1042/BST0350721
-
[34]
(34) Rolz, C.; Mierke, D. F. Biophys. Chem. 2001, 89, 119. doi: 10.1016/S0301-4622(00)00222-2(34) Rolz, C.; Mierke, D. F. Biophys. Chem. 2001, 89, 119. doi: 10.1016/S0301-4622(00)00222-2
-
[35]
(35) Barbier, J. R.; MacLean, S.; Whitfield, J. F.; Morley, P.;Willick,G. E. Biochemistry 2001, 40, 8955. doi: 10.1021/bi010460k(35) Barbier, J. R.; MacLean, S.; Whitfield, J. F.; Morley, P.;Willick,G. E. Biochemistry 2001, 40, 8955. doi: 10.1021/bi010460k
-
[36]
(36) Luck, M. D.; Carter, P. H.; Gardella, T. J. Mol. Endocrinol.1999, 13, 670. doi: 10.1210/me.13.5.670(36) Luck, M. D.; Carter, P. H.; Gardella, T. J. Mol. Endocrinol.1999, 13, 670. doi: 10.1210/me.13.5.670
-
[37]
(37) Gardella, T. J.; Juppner, H.;Wilson, A. K.; Keutmann, H. T.;Abou-Samra, A. B.; Segre, G. V.; Bringhurst, F. R.; Potts, J. T.,Jr.; Nussbaum, S. R.; Kronenberg, H. M. Endocrinology 1994,135, 1186. doi: 10.1210/en.135.3.1186(37) Gardella, T. J.; Juppner, H.;Wilson, A. K.; Keutmann, H. T.;Abou-Samra, A. B.; Segre, G. V.; Bringhurst, F. R.; Potts, J. T.,Jr.; Nussbaum, S. R.; Kronenberg, H. M. Endocrinology 1994,135, 1186. doi: 10.1210/en.135.3.1186
-
[38]
(38) Bisello, A.; Adams, A. E.; Mierke, D. F.; Pellegrini, M.;Rosenblatt, M.; Suva, L. J.; Chorev, M. J. Biol. Chem. 1998,273, 22498. doi: 10.1074/jbc.273.35.22498(38) Bisello, A.; Adams, A. E.; Mierke, D. F.; Pellegrini, M.;Rosenblatt, M.; Suva, L. J.; Chorev, M. J. Biol. Chem. 1998,273, 22498. doi: 10.1074/jbc.273.35.22498
-
[39]
(39) Monticelli, L.; Mammi, S.; Mierke, D. F. Biophys. Chem. 2002,95, 165. doi: 10.1016/S0301-4622(02)00005-4(39) Monticelli, L.; Mammi, S.; Mierke, D. F. Biophys. Chem. 2002,95, 165. doi: 10.1016/S0301-4622(02)00005-4
-
[40]
(40) Gensure, R. C.; Shimizu, N.; Tsang, J.; Gardella, T. J. Mol. Endocrinol. 2003, 17, 2647. doi: 10.1210/me.2003-0275
(40) Gensure, R. C.; Shimizu, N.; Tsang, J.; Gardella, T. J. Mol. Endocrinol. 2003, 17, 2647. doi: 10.1210/me.2003-0275
-
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