Citation: Yuan Xin TIAN, Chao CHEN, Xiao Yong ZOU, Jian Ding QIU, Pei Xiang CAI, Jin Yuan MO. Fourier Power Spectrum Analysis of Exons for the Period-3 Behavior[J]. Chinese Chemical Letters, ;2005, 16(7): 939-942. shu

Fourier Power Spectrum Analysis of Exons for the Period-3 Behavior

1.
School of Chemistry and Chemical Engineering, Sun Yet-Sun University, Guangzhou 510275;
2.
Department of Chemical Engineering, Pingxiang College, Pingxiang 337055;
3.
State Key Laboratory of Chem/Biosensing and Chemometrics, Hunan University, Changsha 410082

Received Date: 16 August 2004

Fund Project: This work was supported by the National Natural Science Foundation of China (Grants 20475068), the Natural Science Foundation of Guangdong Province (Contact No. 031577), and the Opening Foundation of State Key Laboratory of Chem/Biosensing and Chemometrics of Hunan University (2003).

The period-3 behaviors of 105 exons from 20 genes in human were studied by Fourier power spectrum. The results indicated that not all exons show the period-3 behavior. The exons were adjusted in order to make them accord with the order of the protein translated, and we found that the period-3 character is relation to the length of exons and the bases distribution in the three codon position. Furthermore, as long as the exons with period-3 behavior accord with the order of protein translated, they would exhibit the synonymous codons usage preference, and the codons with g/c at the third position are used in higher frequency. The results are significant to the gene prediction and the research on the introns.
- Period-3 behavior,
- Fourier power spectrum,
- exons
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