生物热化学和热动力学研究进展

引用本文: 谢文, 周莲娇, 徐娟, 郭清莲, 蒋风雷, 刘义. 生物热化学和热动力学研究进展[J]. 物理化学学报, 2020, 36(6): 1905051-0. doi: 10.3866/PKU.WHXB201905051 shu

Citation: Xie Wen, Zhou Lianjiao, Xu Juan, Guo Qinglian, Jiang Fenglei, Liu Yi. Advances in Biothermochemistry and Thermokinetics[J]. Acta Physico-Chimica Sinica, 2020, 36(6): 1905051-0. doi: 10.3866/PKU.WHXB201905051 shu

生物热化学和热动力学研究进展

谢文 ^1, ,
周莲娇 ^2, ,
徐娟 ^2, ,
郭清莲 ^1, ,
蒋风雷 ^2, ,
刘义 ^{2,
,}

1.
武汉大学中南医院检验科，武汉 430071
2.
武汉大学化学与分子科学学院，武汉 430072

作者简介:

刘义，武汉大学化学与分子科学学院教授、博士生导师。2002年获教育部高校青年教师奖、国务院政府特殊津贴；2012年获国家杰出青年科学基金；2014年获批湖北省创新研究群体、首批武汉黄鹤英才(科技)计划。主要研究方向为生物热化学与热分析、纳米材料生物效应和靶向药物化学;

通讯作者: 刘义, yiliuchem@whu.edu.cn

基金项目:
国家自然科学基金(21873075, 21573168)资助项目

摘要: 生命相关过程伴随着极其复杂的化学和物理过程，包含着物质变化和能量转换，其中部分能量不可避免地会以热的形式表现出来。用微量热技术和热动力学方法，研究复杂生命体系和相关反应的热动力学过程，可宏观地、本质地反映生命相关过程的内在规律。本文综述了生物量热学方法和技术在生命科学中的应用，介绍了生物量热技术在生态系统、生物组织和器官、细胞水平、亚细胞水平和分子层面等不同生物层次和结构水平上的研究现状和进展。

关键词:

English

Advances in Biothermochemistry and Thermokinetics

1.
Department of Clinical Laboratory, Zhongnan Hospital, Wuhan University, Wuhan 430071, P. R. China
2.
College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072, P. R. China

Corresponding author: Liu Yi, Email: yiliuchem@whu.edu.cn

Received Date: 14 May 2019
Accepted Date: 19 June 2019
Revised Date: 19 June 2019
Available Online: 15 June 2020
Fund Project:
The project was supported by the National Science Foundation of China (21873075, 21573168)

Abstract: Biological systems can be regarded as complex and open thermodynamic systems. All processes involved in biological growth and metabolism are accompanied by material and energy exchange. During metabolism, energy in the organisms is released in the form of heat, i.e., metabolic heat, which is the basis for development in the field of biothermochemistry. The calorimetric method considers the thermal effects produced by the various forms of action as the research object, to reveal the law of energy change and quantitative energy conversion. Studying the thermodynamic processes of complex biological systems and related reactions through microcalorimetry and thermodynamic methods reflects the intrinsic laws of life-related processes macroscopically and intrinsically. With the tremendous development and progress in microcalorimetry in terms of the temperature measurement accuracy, stability of temperature control, automation, and multi-functionalization, calorimetry has been widely used in life sciences. It can be used to describe macroscopic processes such as ecosystems and biological evolution, observe organismal and cell growth, examine mitochondrial metabolism, and study problems at the molecular level, including enzymatic reactions and interactions between small molecules and biomacromolecules. Herein, the application of biomass calorimetry in the life sciences is reviewed. The status and progress of biomass calorimetry at different biological and structural levels, such as the ecosystem, biological, organ, cellular, subcellular, and molecular levels are introduced. For example, soil microbial metabolic activity is a universal index for evaluating soil quality. The growth and metabolism of organisms as well as the physical and chemical processes of substances in soil are often accompanied by heat release, which is usually a nonselective signal. The use of isothermal microcalorimetry to nonspecifically monitor and record soil microbial metabolic characteristics has promoted the study of microbial metabolism in complex soil systems. The application of calorimetry to the study of tissues and organs mainly involves the calorimetric study of isolated animal and plant tissues and organs. Calorimetry of animal and microbial cells is considered the most common application of calorimetry in life sciences research. It mainly involves the classification and identification of bacteria, their growth and metabolism, inhibition mechanisms of drugs on microbial growth, principles of kinetics, and the thermodynamic characteristics of microbial growth and metabolism. However, owing to the lack of specificity of biomass calorimetry and the lack of direct access to information at the molecular level, more applications of calorimetry combined with other analytical techniques (especially in biology, medicine, and pharmacy) are needed in the future.

Key words:

1. [1]
  Held C., Sadowski G., Annu. Rev. Chem. Biomol. Eng. 2016, 7, 395. doi: 10.1146/annurev-chembioeng-080615-034704
2. [2]
  Maskow T., Schubert T., Wolf A., Buchholz F., Regestein L., Buechs J., Mertens F., Harms H., Lerchner J., Appl. Microbiol. Biotechnol. 2011, 92 (1), 55. doi: 10.1007/s00253-011-3497-7
3. [3]
  Alberty R. A., Goldberg R. N., Biochemistry 1992, 31 (43), 10610. doi: 10.1021/bi00158a025
4. [4]
  刘义, 谢卫红, 谢昌礼, 屈松生.物理化学学报, 1996, 12 (2), 156. doi: 10.3866/PKU.WHXB19960213Liu Y., Xie W. H., Xie C. L., Qu S. S., Acta. Phys. -Chim. Sin. 1996, 12 (2), 156.
5. [5]
  刘义, 谭安民, 谢昌礼, 王存信, 屈松生, 郝宗宇.物理化学学报, 1996, 12 (4), 377. doi: 10.3866/PKU.WHXB19960419Liu Y., Tan A. M., Xie C. L., Wang C. X., Acta. Phys. -Chim. Sin. 1996, 12 (4), 377.
6. [6]
  刘义, 谭安民, 谢昌礼, 王存信, 屈松生, 郝宗宇.物理化学学报, 1996, 12 (5), 451. doi: 10.3866/PKU.WHXB19960513Liu Y., Tan A. M., Xie C. L., Wang C. X., Acta. Phys. -Chim. Sin. 1996, 12 (5), 451.
7. [7]
  刘义, 王存信, 谢昌礼, 屈松生, 郝宗宇.物理化学学报, 1996, 12 (7), 659. doi: 10.3866/PKU.WHXB19960716Liu Y., Wang C. X., Xie C. L., Qu S. S., Acta. Phys. -Chim. Sin. 1996, 12 (7), 659.
8. [8]
  Ozilgen M., Int. J. Energy Res. 2017, 41 (11), 1513. doi: 10.1002/er.3712
9. [9]
  Kabo G. J., Blokhin A. V., Paulechka E., Roganov G. N., Frenkel M., Yursha L. A., Diky V., J. Chem. Thermodyn. 2019, 131, 225. doi: 10.1016/j.jct.2018.10.025
10. [10]
  姜兰兰, 刘燕, 郑世学.应用与环境生物学报, 2016, 22 (4), 0732. doi: 10.3724/SP.J.1145.2015.10031Jiang L. L., Liu Y., Zheng S. X., Chin. J. Appl. Environ. Biol. 2016, 22 (4), 0732.
11. [11]
  Hansen L. D., Barros N., Transtrum M. K., Rodriguez-Anon J. A., Proupin J., Pineiro V., Arias-Gonzalez A., Thermochim. Acta 2018, 670, 128. doi: 10.1016/j.tca.2018.10.010
12. [12]
  Barros N., Feijoo S., Perez-Cruzado C., Hansen L. D., AIMS Microbiol. 2017, 3 (4), 762. doi: 10.3934/microbiol.2017.4.762
13. [13]
  Barros N., Salgado J., Villanueva M., Rodriquez-Anon. J.; Proupin J., Feijoo S., Martin-Pastor. M. J. Therm. Anal. Calorim. 2010, 104 (1), 53. doi: 10.1007/s10973-010-1163-4
14. [14]
  Xu J. B., Feng Y. Z., Barros N., Zhong L. H., Chen R. R., Lin, X. G. J. Therm. Anal. Calorim. 2016, 127 (2), 1457. doi: 10.1007/s10973-016-5952-2
15. [15]
  Cenciani K., Freitas S. D., Critter S. A. M., Airoldi C., Rev. Bras. Cienc. Solo 2011, 35, 1167. doi: 10.1590/S0100-06832011000400010
16. [16]
  Cenciani K., Freitas S. D., Critter S. A. M., Airoldi C., Sci. Agric. 2008, 65 (6), 674. doi: 10.1590/S0103-90162008000600016
17. [17]
  Menert A., Paalme V., Juhkam J., Vilu R., Thermochim. Acta 2004, 420 (1–2), 89. doi: 10.1016/j.tca.2003.12.032
18. [18]
  Haman N., Ferrentino G., Imperiale S., Scampicchio M., J. Therm. Anal. Calorim. 2008, 132 (2), 1065. doi: 10.1007/s10973-018-6995-3
19. [19]
  Hasan S. M. K., Manzocco L., Morozova K., Nicoli M. C., Scampicchio M., Thermochim. Acta 2017, 649, 63. doi: 10.1016/j.tca.2017.01.008
20. [20]
  Hasan S. M. K., .; Asaduzzaman M., Merkyte V., Morozova K., Scampicchio M., Food Anal. Meth. 2017, 11 (2), 432. doi: 10.1007/s12161-017-1014-z
21. [21]
  Haman N., Longo E., Schiraldi A., Scampicchio M., Thermochim. Acta 2017, 658, 1. doi: 10.1016/j.tca.2017.10.012
22. [22]
  Morozova K., Andreotti C., Armani M., Cavani L., Cesco S., Cortese L., Gerbi V., Mimmo T., Spena P. R., Scampicchio M., J. Therm. Anal. Calorim. 2016, 127 (2), 1351. doi: 10.1007/s10973-016-5891-y
23. [23]
  Rakhmatullina D. F., Gordon L. K., Ponomareva A. A., Ogorodnikova T. I., Alyab'ev A. Y., Iyudin V. S., Obynochnyi A. A., Russ. J. Plant Physiol. 2011, 58 (1), 100. doi: 10.1134/S1021443710061044
24. [24]
  颜承农, 刘义, 颜蔚, 宋昭华, 屈松生.自然杂志, 1997, 19 (5), 288.Yan C. N., Liu Y., Yan W., Song Z. H., Qu S. S., Chin. J. Nat. 1997, 19 (5), 288.
25. [25]
  Gao D., Ren Y. S., Yan D., Acta Pharm. Sin. B 2014, 49 (3), 385. doi: 10.16438/j.0513-4870.2014.03.018
26. [26]
  Winkelmann M., Hunger N., Huttl R., Wolf G., Thermochim. Acta 2009, 482 (1–2), 12. doi:10.1016/j.tca.2008.10.007
27. [27]
  Russel M., Liu C. R., Alam A., Wang F., Yao J., Daroch M., Shah M. R., Wang Z. M., Environ. Sci. Pollut. Res. 2018, 25(19), 18519. doi: 10.1007/s11356-018-1926-1
28. [28]
  Howard-Varona C., Hargreaves K. R., Abedon S. T., Sullivan M. B., ISME J. 2017, 11 (7), 1511. doi: 10.1038/ismej.2017.16
29. [29]
  Xu J., Kiesel B., Kallies R., Jiang F. L., Liu Y., Maskow T., Microb. Biotechnol. 2018, 11 (6), 1112. doi: 10.1111/1751-7915.13042
30. [30]
  Xu J., He H., Wang Y. Y., Yan R., Zhou L. J., Liu Y. Z., Jiang F. L., Maskow T., Liu Y., Environ. Sci.: Nano 2018, 5 (7), 1556. doi: 10.1039/c8en00142a
31. [31]
  Liu G. S., Liu Y., Chen X. D., Liu P., Shen P., Qu S. S., J. Virol. Methods 2003, 112 (1–2), 137. doi: 10.1016/S0166-0934(03)00214-3
32. [32]
  Liu G. S., Li M. J., Chen X. D., Liu Y., Zhu J. C., Shen P., Thermochim. Acta 2005, 435(1), 34. doi: 10.1016/j.tca.2005.03.022
33. [33]
  刘国生, 冉治霖, 王海磊, 刘义, 沈萍, 卢雁.化学学报, 2007, 65(10), 917. doi: 10.1007/s11458-008-0010-7Liu G. S., Ran Z. L., Wang H. L., Liu Y., Shen P., Lu Y., Acta Chim. Sin. 2007, 65(10), 917.
34. [34]
  Brueckner D., Krahenbuhl S., Zuber U., Bonkat G., Braissant O., J. Appl. Microbiol. 2017, 123 (3), 773. doi: 10.1111/jam.13520
35. [35]
  Gaisford S., Beezer A. E., Bishop A. H., Walker M., Parsons D., Int. J. Pharmacol. 2009, 366 (1–2), 111. doi: 10.1016/j.ijpharm.2008.09.005
36. [36]
  Said J., Walker M., Parsons D., Stapleton P., Beezer A. E., Gaisford S., Int. J. Pharmacol. 2014, 474 (1–2), 177. doi: 10.1016/j.ijpharm.2014.08.034
37. [37]
  Moreno M. G., Trampuz A., Di Luca M., Res. Microbiol. 2017, 72(11), 3085. doi: 10.1093/jac/dkx265
38. [38]
  Butini M. E., Cabric S., Trampuz A., Di Luca M., J. Antimicrob. Chemother. 2018, 161, 252. doi: 10.1016/j.colsurfb.2017.10.050
39. [39]
  Tkhilaishvili T., Di Luca M., Abbandonato G., Maiolo E. M., Klatt A. B., Reuter M., Moncke-Buchner E., Trampuz A., J. Appl. Microbiol. 2018, 169(Suppl, 9), 515. doi: 10.1016/j.resmic.2018.05.010
40. [40]
  Wu F. G., Sun H. Y., Zhou Y., Deng G., Yu Z. W., RSC Adv. 2015, 5 (1), 726. doi: 10.1039/c4ra07569b
41. [41]
  Wu F. G., Jiang Y. W., Chen Z., Yu Z. W., Langmuir 2016, 32 (15), 3655. doi: 10.1021/acs.langmuir.6b00235
42. [42]
  Said J., Walker M., Parsons D., Stapleton P., Beezer A. E., Gaisford S., Methods 2015, 76, 35. doi: 10.1016/j.ymeth.2014.12.002
43. [43]
  Mishra S., Chattopadhyay A., Naaz S., Ghosh A. K., Das A. R., Bandyopadhyay D., Life Sci. 2019, 218, 96. doi: 10.1016/j.lfs.2018.12.035
44. [44]
  Dong P., Li J. H., Xu S. P., Wu X. J., Xiang X., Yang Q. Q., Jin J. C., Liu Y., Jiang F. L., J. Hazard. Mater. 2018, 308, 139. doi: 10.1016/j.jhazmat.2016.01.017
45. [45]
  Zhao J., Ma L., Xiang X., Guo Q. L., Jiang F. L., Liu Y., Chemosphere 2016, 153, 414. doi: 10.1016/j.chemosphere.2016.03.082
46. [46]
  Yang L. Y., Gao J. L., Gao T., Dong P., Ma L., Jiang F. L., Liu Y., J. Hazard. Mater. 2016, 301, 119. doi: 10.1016/j.jhazmat.2015.08.046
47. [47]
  Lai L., Li Y. P., Mei P., Chen W., Jiang F. L., Liu Y., J. Membr. Biol. 2016, 249 (6), 757. doi: 10.1007/s00232-016-9920-3
48. [48]
  Shore E. R., Awais M., Kershaw N. M., Gibson R. R., Pandalanen S., Latawiec D., Wen L., Javed M. A., Criddle D. N., Berry N., et al. J. Med. Chem. 2016, 59 (6), 2596. doi: 10.1021/acs.jmedchem.5b01801
49. [49]
  Jiao X. Y., Yuan L., Wu C., Liu Y. J., Jiang F. L., Hu Y. J., Liu Y., Toxicol. Res. 2018, 7(2), 191. doi: 10.1039/C7TX00234C
50. [50]
  袁莲, 刘玉娇, 何欢, 蒋风雷, 李会荣, 刘义.物理化学学报, 2018, 34(1), 73. doi: 10.3866/PKU.WHXB201707043Yuan L., Liu Y. J., He H., Jiang F. L.; Li H. R., Liu Y., Acta Phys. -Chim. Sin. 2018, 34 (1), 73.
51. [51]
  Yuan L., Gao T., He H., Jiang F. L., Liu Y., Toxicol. Res. 2017, 6(5), 621. doi: 10.1039/C7TX00079K
52. [52]
  Yuan L., Zhang J. Q., Liu Y. J., Zhao J., Jiang F. L., Liu Y., J. Inorg. Biochem. 2017, 177, 17. doi: 10.1016/j.jinorgbio.2017.08.012
53. [53]
  Zhao J., Zhou Z. Q., Jin J. C., Yuan L., He H., Jiang F. L., Yang X. G., Dai J., Liu Y., Chemosphere 2014, 100, 194. doi: 10.1016/j.chemosphere.2013.11.031
54. [54]
  Xia C. F., Jin J. C., Yuan L., Zhao J., Chen X. Y., Jiang F. L., Qin C. Q., Dai J., Liu Y., Chemosphere 2013, 91(11), 1577. doi: 10.1016/j.chemosphere.2012.12.049
55. [55]
  Frank N., Lissner A., Winkelmann M., Huttl R., Mertens F. O., Kaschabek S. R., Schlomann M., Biodegradation 2010, 21 (2), 179. doi: 10.1007/s10532-009-9292-9
56. [56]
  Goldberg R. N., Schliesser J., Mittal A., Decker S. R., Santos A. F. L. O. M., Freitas V. L. S., Urbas A., Lang B. E., Heiss C., da Silva M. D. M. C. R., et al. J. Chem. Thermodyn. 2015, 81, 184. doi: 10.1016/j.jct.2014.09.006
57. [57]
  Popovic M., Woodfield B. F., Hansen L. D., J. Therm. Anal. Calorim. 2019, 128, 244. doi: 10.1016/j.jct.2018.08.006
58. [58]
  Liu W. T., Zhang Y. Z., Cui N. B., Wang T., Food Technol. Biotechnol. 2019, 76, 194. doi: 10.1016/j.procbio.2018.10.017
59. [59]
  Mason M., Scampicchio M., Quinn C. F., Transtrum M. K., Baker N., Hansen L. D., Kenealey J. D., J. Food Sci. 2018, 83 (2), 326. doi: 10.1111/1750-3841.14023
60. [60]
  Aggarwal N., Sharma M., Banipal T. S., Banipal P. K., J. Chem. Eng. Data 2019, 64 (2), 517. doi: 10.1021/acs.jced.8b00681
61. [61]
  Kabo G. J., Paulechka Y. U., Voitkevich O. V., Blokhin A. V., Stepurko E. N., Kohut S. V., Voznyi Y. V., J. Chem. Thermodyn. 2015, 85, 101. doi: 10.1016/j.jct.2015.01.005
62. [62]
  Wu F. G., Jiang Y. W., Sun H. Y., Luo J. J., Yu Z. W., J. Phys. Chem. B 2015, 119 (45), 14382. doi: 10.1021/acs.jpcb.5b07277
63. [63]
  Belliardo C., Di Giorgio C., Chaspoul F., Gallice P., Berge-Lefranc D., J. Chem. Thermodyn. 2018, 125, 271. doi: 10.1016/j.jct.2018.05.028
64. [64]
  Burova T. V., Grinberg N. V., Dubovik A. S., Olenichenko E. A., Orlov V. N., Grinberg V. Y. Polymer 2017, 108, 97. doi: 10.1016/j.polymer.2016.11.049
65. [65]
  Escobar J. F. B., Restrepo M. H. P., Fernandez D. M. M., Martinez A. M., Giordani C., Castelli F., Sarpietro M. G., Colloids Surf. B 2018, 166, 203. doi: 10.1016/j.colsurfb.2018.03.023
66. [66]
  Boros E., Sebak F., Heja D., Szakacs D., Zboray K., Schlosser G., Micsonai A., Kardos J., Bodor A., Pal G., J. Mol. Biol. 2019, 431 (3), 557. doi: 10.1016/j.jmb.2018.12.003
67. [67]
  Krauss N., Wessner H., Welfle K., Welfle H., Scholz C., Seifert M., Zubow K., Ay J., Hahn M., Scheerer P., et al. Proteins: Struct., Funct., Genet. 2008, 73 (3), 552. doi: 10.1002/prot.22080
68. [68]
  Alvarez-Armenta A., Carvajal-Millan E., Pacheco-Aguilar R., Garcia-Sanchez G., Marquez-Rios E., Scheuren-Acevedo S. M., Ramirez-Suarez J. C., Environ. Sci. Pollut. Res. 2019, 57 (1), 39. doi: 10.17113/ftb.57.01.19.5848
69. [69]
  Wu J. J., Xie D. W., Chen X. J., Tang Y. J., Wang L. X., Xie J. L., Wei D. Z., Process Biochem. 2019, 79, 97. doi: 10.1016/j.procbio.2018.12.018
70. [70]
  Yang L. Y., Hua S. Y., Zhou Z. Q., Wang G. C., Jiang F. L., Liu Y., Colloids Surf. B 2017, 157, 261. doi: 10.1016/j.colsurfb.2017.05.065
71. [71]
  Zhang Y., Xu Z. Q., Liu X. R., Qi Z. D., Jiang F. L., Liu Y., J. Solut. Chem. 2012, 41 (2), 351. doi: 10.1007/s10953-012-9791-x

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1.
沈阳化工大学材料科学与工程学院沈阳 110142

生物热化学和热动力学研究进展

通讯作者: 刘义, yiliuchem@whu.edu.cn

English

Advances in Biothermochemistry and Thermokinetics

Corresponding author: Liu Yi, Email: yiliuchem@whu.edu.cn

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