Citation: Xingyuan Lu,  Yutao Yao,  Junjing Gu,  Peifeng Su. Energy Decomposition Analysis and Its Application in the Many-Body Effect of Water Clusters[J]. University Chemistry, ;2025, 40(3): 100-107. doi: 10.12461/PKU.DXHX202405074 shu

Energy Decomposition Analysis and Its Application in the Many-Body Effect of Water Clusters

  • Corresponding author: Peifeng Su, supi@xmu.edu.cn
  • Received Date: 7 May 2024
    Revised Date: 14 August 2024

  • Energy decomposition analysis (EDA) is a quantitative theoretical method for studying molecular interactions. It has been widely applied in various fields including molecule self-assembly, drug design, mechanism of chemical reactions, and development of force fields. The existing undergraduate chemistry curriculum, however, often provides superficial explanations of molecular interactions, sometimes with inconsistencies. To deepen undergraduates’ understanding of molecular interactions, this article briefly outlines the basic concepts of EDA and introduces the representative GKS-EDA method, along with its study of multi-body effects in hexamer water systems.
  • 加载中
    1. [1]

    2. [2]

    3. [3]

      Pearson, R. G. Chem. Rev. 1985, 85 (1), 41.

    4. [4]

      Hobza, P.; Havlas, Z. Chem. Rev. 2000, 100 (11), 4253.

    5. [5]

      Custelcean, R.; Jackson, J. E. Chem. Rev. 2001, 101 (7), 1963.

    6. [6]

      Belkova, N. V.; Epstein. L. M.; Filippov, O. A.; Shubina, E. S. Chem. Rev. 2016, 116 (15), 8545.

    7. [7]

      Mahmudov, K T.; Pombeiro, A. J. L. Chem-Eur. J. 2016, 22 (46), 16356.

    8. [8]

      Weinhold; Frank; Roger A. K. Angew. Chem. Int. Ed. 2014, 53 (42), 11214.

    9. [9]

      Stone, A. The Theory of Intermolecular Forces; Oxford University Press: Oxford, UK, 2013.

    10. [10]

      Jeziorski, B.; Moszynski, R.; Szalewicz, K. Chem. Rev. 1994, 94 (7), 1887.

    11. [11]

      Bickelhaupt, F. M.; Baerends, E. J. Kohn-Sham Density Functional Theory: Predicting and Understanding Chemistry. In Reviews in Computational Chemistry; Lipkowitz, K. B., Boyd, D. B. Eds.; Wiley: San Francisco, CA, USA, 2000; pp. 1-86.

    12. [12]

      Hohenstein, E. G.; Sherrill, C. D. Wires Comput. Mol. Sci. 2012, 2 (2), 304.

    13. [13]

      Szalewicz, K. Wires Comput. Mol. Sci. 2012, 2 (2), 254.

    14. [14]

      Jansen, G. Wires Comput. Mol. Sci. 2014, 4 (2), 127.

    15. [15]

      Phipps, M. J.; Fox, T.; Tautermann, C. S.; Skylaris, C-K. Chem. Soc. Rev. 2015, 44 (10), 3177.

    16. [16]

      Zhao, L.; von Hopffgarten, M.; Andrada, D. M.; Frenking, G. Wires Comput. Chem. Rev. 2018, 8 (3), e1345.

    17. [17]

      Su, P.; Tang, Z.; Wu, W. Wires Comput. Chem. Rev. 2020, 10 (5), e1460.

    18. [18]

      Kitaura, K.; Morokuma. K. Int. J. Quantum Chem. 1976, 10, 325.

    19. [19]

      Stevens, W. J.; Fink. W. H. Chem. Phys. Lett. 1987, 139 (1), 15.

    20. [20]

      Chen, W.; Gordon, M. S. J. Phys. Chem. 1996, 100 (34), 14316.

    21. [21]

      Bagus, P. S.; Hermann, K.; Bauschlicher Jr., C. W. J. Chem. Phys. 1984, 80 (9), 4378.

    22. [22]

      Bagus, P. S.; Illas, F. J. Chem. Phys. 1992, 96 (12), 8963.

    23. [23]

      Mo, Y.; Gao, J.; Peyerimhoff, S. D. J. Chem. Phys. 2000, 112 (13), 5530.

    24. [24]

      Mo, Y.; Bao. P.; Gao. J. Phys. Chem. Chem. Phys. 2011, 13 (15), 6760.

    25. [25]

      Khaliullin, R. Z.; Cobar, E. A.; Lochan, R. C.; Bell, A. T.; Head-Gordon, M. J. Phys. Chem. A. 2007, 111 (36), 8753.

    26. [26]

      Mao, Y.; Horn, P. R.; Head-Gordon, M. Phys. Chem. Chem. Phys. 2017, 19 (8), 5944.

    27. [27]

      Su, P.; Li, H. J. Chem. Phys. 2009, 131 (1), 014102.

    28. [28]

      Szalewicz, K.; Jeziorski, B. Mol. Phys. 1979, 38, 191.

    29. [29]

      Jeziorski, B.; Moszynski, R.; Szalewicz, K. Chem. Rev. 1994, 94, 1887.

    30. [30]

      Nahoko, K.; Yuji, M.; Hirotoshi, M. J. Chem. Educ. 2023, 100 (2), 647.

    31. [31]

      Su, P.; Jiang, Z.; Chen, Z.; Wu, W. J. Phys. Chem. A. 2014, 118 (13), 2531.

    32. [32]

      Su, P.; Tang, Z.; Wu, W. Wires Comput. Mol. Sci. 2020, 10, e1460.

    33. [33]

      Hankins, D.; Moskowitz, J. W.; Stillinger, F. H. J. Chem. Phys. 1970, 53 (12), 4544.

    34. [34]

      Morokuma, K.; Pedersen, L. J. Chem. Phys. 1968, 48 (7), 3275.

    35. [35]

      Xantheas, S. S. J. Chem. Phys. 1994, 100 (10), 7523.

    36. [36]

      Medders, G. R.; Götz, A. W.; Morales, M. A.; Bajaj, P.; Paesani, F. J. Chem. Phys. 2015, 143 (10), 104102.

    37. [37]

      Dahlke, E. E; Truhlar, D. G. J. Chem. Theory Comput. 2007, 3 (1), 46.

    38. [38]

      Gregory, J. K.; Clary, D. C. J. Phys. Chem. 1996, 100 (46), 18014.

    39. [39]

      Milet, A.; Moszynski, R.; Wormer, P. E.; van der Avoird, A. J. Phys. Chem. A 1999, 103 (34), 6811.

    40. [40]

      Schmitt-Monreal, D.; Jacob, C. R. J. Chem. Theory Comput. 2021, 17 (7), 4144.

    41. [41]

      Herman, K. M.; Xantheas, S. S. Phys. Chem. Chem. Phys. 2023, 25 (10), 7120.

    42. [42]

      Dahlke, E. E.; Truhlar, D. G. J. Chem. Theory Comput. 2007, 3 (4), 1342.

    43. [43]

      Heindel, J. P.; Herman, K. M.; Xantheas, S. S. Annu. Rev. Phys. Chem. 2023, 74, 337.

    44. [44]

      Heindel, J. P.; Xantheas, S. S. J. Chem. Theory Comput. 2020, 16 (11), 6843.

    45. [45]

      Schmitt-Monreal, D.; Jacob, C. R. J. Chem. Theory Comput. 2021, 17 (7), 4144.

    46. [46]

      Nandi, A.; Qu, C.; Houston, P. L.; Conte, R.; Yu, Q.; Bowman, J. M. J. Phys. Chem. Lett. 2021, 12 (42), 10318.

    47. [47]

      Møller, C.; Plesset, M. S. Phys. Rev. 1934, 46 (7), 618.

    48. [48]

      Dunning Jr, T. H. J. Chem. Phys. 1989, 90 (2), 1007.

    49. [49]

      Chai, J. D.; Head-Gordon, M. J. Chem. Phys. 2008, 128 (8), 084106.

    50. [50]

      Iuchi, S.; Izvekov, S.; Voth, G. A. J. Chem. Phys. 2007, 126 (12), 124505.

  • 加载中
    1. [1]

      Conghao Shi ,  Ranran Wang ,  Juli Jiang ,  Leyong Wang . The Illustration on Stereoisomers of Macrocycles Containing Multiple Chiral Centers via Tröger Base-based Macrocycles. University Chemistry, 2024, 39(7): 394-397. doi: 10.3866/PKU.DXHX202311034

    2. [2]

      Shengwen XU , Longlong YANG , Houji CAO , Deshuang TU , Xing WEI , Changsheng LU , Hong YAN . Research progress on light-induced functionalization of polyhedral carborane clusters. Chinese Journal of Inorganic Chemistry, 2025, 41(11): 2187-2200. doi: 10.11862/CJIC.20250192

    3. [3]

      Chaowei Zhao , Ting Li , Dongdong Xia , Qian Xie , Jie Fang , Yuefeng Zhang , Yu Xie , Alex K.-Y. Jen . Solvatochromic Ti-oxo clusters as cathode interlayer for efficient organic solar cells. Acta Physico-Chimica Sinica, 2026, 42(10): 100280-0. doi: 10.1016/j.actphy.2026.100280

    4. [4]

      Yingying Wang ,  Yang Yu . 基于统计能量分析的酶催化机理探究:以丝氨酸水解酶为例. University Chemistry, 2026, 41(9): 373-381. doi: 10.12461/PKU.DXHX202508066

    5. [5]

      Liang TANG , Jingfei NI , Kang XIAO , Xiangmei LIU . Synthesis and X-ray imaging application of lanthanide-organic complex-based scintillators. Chinese Journal of Inorganic Chemistry, 2024, 40(10): 1892-1902. doi: 10.11862/CJIC.20240139

    6. [6]

      Shihao Yang , Zhiqiang Guo , Zirui Jia , Yi Liu , Dingshuo Wang , Zengchao Li , Haifeng Li , Hua Qiu , Guanglei Wu . Precisely engineered heterointerfaces in bimetallic MOFs enable multiscale polarization synergy for efficient electromagnetic attenuation. Acta Physico-Chimica Sinica, 2026, 42(9): 100348-0. doi: 10.1016/j.actphy.2026.100348

    7. [7]

      Yaling Chen . Basic Theory and Competitive Exam Analysis of Dynamic Isotope Effect. University Chemistry, 2024, 39(8): 403-410. doi: 10.3866/PKU.DXHX202311093

    8. [8]

      Zhao Lu , Hu Lv , Qinzhuang Liu , Zhongliao Wang . Modulating NH2 Lewis Basicity in CTF-NH2 through Donor-Acceptor Groups for Optimizing Photocatalytic Water Splitting. Acta Physico-Chimica Sinica, 2024, 40(12): 2405005-0. doi: 10.3866/PKU.WHXB202405005

    9. [9]

      Mengyu LI , Kewei TONG , Li ZHANG , Minghua LU , Abudula , Luwen ZHU , Yi LIU , Luying WANG , Baiqiao SONG , Zunqi LIU , Peng YANG , Yanhu WANG . Functionalizing the cavities of imidazolyl polyoxovanadate‒organic polyhedra with embedded pyridine to modulate iodine adsorption. Chinese Journal of Inorganic Chemistry, 2026, 42(9): 1974-1983. doi: 10.11862/CJIC.20260154

    10. [10]

      Junyu Peng ,  Feng Wang ,  Hongmei Yuan ,  Xiaoli Sun . Exploration of the “Sheep-Flock Effect” Teaching Model Based on Dual Preview: Taking Instrumental Analysis Experiment Courses in Local Universities as an Example. University Chemistry, 2025, 40(9): 310-317. doi: 10.12461/PKU.DXHX202412098

    11. [11]

      Chenxu Gong ,  Chunfa Xu ,  Hong Yan ,  Yuanming Li ,  Yaofeng Yuan ,  Yu-wu Zhong ,  Keyin Ye . 核磁共振碳谱中19F-13C自旋耦合效应及实例分析. University Chemistry, 2026, 41(9): 457-464. doi: 10.12461/PKU.DXHX202509072

    12. [12]

      Zhexue Lu ,  Ping Wu ,  Huihui Li ,  Libai Wen . 四“味”一体的无机及分析化学课程思政. University Chemistry, 2025, 40(6): 333-340. doi: 10.12461/PKU.DXHX202405196

    13. [13]

      Fanpeng Shang ,  Jiantuo Chen . 多视角分析DMPE盘状双层胶束——第38届中国化学奥林匹克(初赛)第4题解析. University Chemistry, 2025, 40(8): 388-393. doi: 10.12461/PKU.DXHX202410034

    14. [14]

      Zhixin Zhou ,  Ran Chen ,  Yuanjian Zhang ,  Songqin Liu ,  Yanfei Shen . 分析化学课程本硕一体化的全英文教学改革. University Chemistry, 2025, 40(6): 64-70. doi: 10.12461/PKU.DXHX202407093

    15. [15]

      Tieping CAO , Yuejun LI , Dawei SUN . Surface plasmon resonance effect enhanced photocatalytic CO2 reduction performance of S-scheme Bi2S3/TiO2 heterojunction. Chinese Journal of Inorganic Chemistry, 2025, 41(5): 903-912. doi: 10.11862/CJIC.20240366

    16. [16]

      Kexin Dong , Chuqi Shen , Ruyu Yan , Yanping Liu , Chunqiang Zhuang , Shijie Li . Integration of Plasmonic Effect and S-Scheme Heterojunction into Ag/Ag3PO4/C3N5 Photocatalyst for Boosted Photocatalytic Levofloxacin Degradation. Acta Physico-Chimica Sinica, 2024, 40(10): 2310013-0. doi: 10.3866/PKU.WHXB202310013

    17. [17]

      Wenli MA , Liyan WANG , Jibo ZONG , Zhaofeng SUN , Deshuang TU , Changsheng LU , Hong YAN . Boron cluster modified gold nanoclusters for boron neutron capture therapy. Chinese Journal of Inorganic Chemistry, 2026, 42(6): 1146-1154. doi: 10.11862/CJIC.20260053

    18. [18]

      Weiwei Zhang ,  Yongxin Ren ,  Hong Zhang ,  Ke Lu . Current Situation and Quality Improvement Measures of Undergraduate Education in Modern Analytical Testing Technology under the “Learning, Teaching, and Practicing” Trinity Concept. University Chemistry, 2025, 40(10): 78-85. doi: 10.12461/PKU.DXHX202412006

    19. [19]

      Xinyu CHENG , Xinran CHEN , Fei LI , Chen CHEN , NevisNathaniel L. , Kai CHEN . 两例同构的七元瓜环基超分子自组装体的合成、Hirshfeld表面分析及其性质. Chinese Journal of Inorganic Chemistry, 2026, 42(8): 1637-1646. doi: 10.11862/CJIC.20260049

    20. [20]

      Zongfei YANG , Xiaosen ZHAO , Jing LI , Wenchang ZHUANG . Research advances in heteropolyoxoniobates. Chinese Journal of Inorganic Chemistry, 2024, 40(3): 465-480. doi: 10.11862/CJIC.20230306

Metrics
  • PDF Downloads(0)
  • Abstract views(1808)
  • HTML views(256)

通讯作者: 陈斌, bchen63@163.com
  • 1. 

    沈阳化工大学材料科学与工程学院 沈阳 110142

  1. 本站搜索
  2. 百度学术搜索
  3. 万方数据库搜索
  4. CNKI搜索
Address:Zhongguancun North First Street 2,100190 Beijing, PR China Tel: +86-010-82449177-888
Powered By info@rhhz.net

/

DownLoad:  Full-Size Img  PowerPoint
Return